DNA Databases

My Genome Online – A Challenge To You

Blaine Bettinger 5 Comments

As you may have heard, I recently made my 23andMe and Family Tree DNA autosomal testing results available for download online at “mygenotype,” and dedicated the information to the public domain (if dedicating DNA sequence to the public domain is even possible – I’m currently doing some research in this area and expect to write more in the future).

At “mygenotype” you can download the following:

My Family Tree DNA Results:

  1. Affymetrix Autosomal DNA Results (2010)
  2. Affymetrix X-Chromosome DNA Results (2010)
  3. Illumina Autosomal DNA Results (2011)
  4. Illumina X-Chromosome DNA Results (2011)

My 23andMe Results:

  1. V2 Results (2008)
  2. V3 Results (2010)
  3. Y-DNA Results (2010)
  4. mtDNA Results (2010)

You can also find my SNPedia Promethease reports:

In addition to my genome, Razib Khan of Gene Expression has a spreadsheet of approximately 48 other genomes that are available for download online.

A Challenge To YOU

Now that the information is out there, available to anyone who might be interested, it remains to be seen who might be interested in the information. ... Click to read more!

Announcing the GET Conference 2010

Blaine Bettinger 2 Comments

get-genomes-environments-traits_1266501683140

Daniel Vorhaus of the Genomics Law Report is also a member of the steering committee of the GET (“Genomes, Environments, Traits) Conference 2010.This unique conference, to be held on Tuesday, April 27, 2010 will gather together some of the biggest names in personal genomics, as well as most of the limited number of the people who have released their entire genomes to the public.Tickets for the conference go on sale today here.

As part of the GET Conference 2010, the new BioWeatherMap initiative will officially launch.According to the project’s website, BioWeatherMap is “a global, grassroots, distributed environmental sensing effort aimed at answering some very basic questions about the geographic and temporal distribution patterns of microbial life. Utilizing the power of high-throughput, low cost DNA sequencing and harnessing the drive of an enlightened public we propose a new collaborative research approach aimed at generating a steady stream of environmental samples from many geographic locations to produce high quality data for ongoing discovery and surveillance.” ... Click to read more!

Genetic Genealogy Tidbits

Blaine Bettinger 3 Comments

  • Linda Avey, co-founder of 23andMe, has started a new blog entitled The Life & Times of Lilly Mendel.  I’m looking forward to some interesting reading as Linda establishes the Brainstorm Research Foundation dedicated to the study of Alzheimer’s disease.
    • ... Click to read more!

    23andMe’s Relative Finder Success Stories at ISOGG

    Blaine Bettinger 7 Comments

    ISOGG, the International Society of Genetic Genealogy, has a “Success Stories” page where it posts short summaries of just a few the many successes that genetic genealogy has helped people achieve.  Today I noticed that there are several new summaries regarding “Autosomal DNA Successes,” both of which were the result of 23andMe’s new Relative Finder (currently still in beta testing).

    Relative Finder

    As I recently wrote, Relative Finder is a feature at 23andMe that allows users to compare their autosomal DNA to the autosomal DNA of others to potentially find cousins.  This has long been done with Y-DNA and mtDNA, but this is one of the first times this has been done with autosomal DNA.

    Success Story #1

    The first success story is from someone who used Relative Finder to identify a huge number of potential cousins.  After connecting one of his or her potential 4th cousins, the individuals discovered that they have similar surnames from a certain location in common (in addition to DNA on chromosomes 3 and 10).  This individual also wisely noted that s/he now has “a good idea of the path that two of my DNA segments took through my pedigree to get to me.”  This is something I wrote about recently in “The Future of Genetic Genealogy – Tracing DNA To Individual Ancestors.” ... Click to read more!

    The Mystery of Benjaman Kyle (Powell?) – An Update

    Blaine Bettinger 5 Comments

    image In January I wrote about Benjaman Kyle, an amnesiac who was found on August 31, 2004 next to a dumpster behind a Burger King in Richmond Hill, Georgia.  In that post, “Using Genetic Genealogy to Solve the Mystery of Benjaman Kyle,” I suggested that a Y-DNA test might be helpful in elucidating Mr. Kyle’s biological surname.  Y-DNA testing has shown to be highly useful for identifying unknown surnames (see here and here), and so I contacted Mr. Kyle to suggest the possibility.

    The Results Are In

    Shortly thereafter, Mr. Kyle took a 67-marker test from Family Tree DNA.  The results, announced it seems by Kimberly Powell of Kimberly’s Genealogy Blog, suggest that his surname might actually be POWELL or a variant thereof.  His results are now part of the Powell Surname DNA Project as kit #140314 where he very closely matches the “Joseph Powell Group.”  See more here.  From Kimberly’s post: ... Click to read more!

    Large-Scale Genetic Genealogy Privacy Concerns

    Blaine Bettinger 1 Comment

    thegeneticgenealogist1 I’ve been working on a presentation regarding the future of genetic genealogy, and one aspect of that future is the ability to trace DNA (SNPs, mutations, haplogroups, etc…) through recent history as the result of combining extensive genomic sequencing with massive family tree information.  Although the ability to do this will have many uses (both for genealogy and for personalized medicine), it will also raise a number of privacy issues, as a recent paper suggests.

    A New Privacy Study

    In “Inferential Genotyping of Y Chromosomes in Latter-Day Saints Founders and Comparison to Utah Samples in the HapMap Project,” author Jane Gitschier uses a combination of FamilySearch (http://www.familysearch.org) and Sorenson Molecular Genealogy Foundation (http://www.smgf.org/) to elucidate the Y-chromosome signature of two founders of the LDS Church.  Gitschier then used that information to determine whether anyone who contributed DNA to the HapMap project was related to these individuals via the Y-chromosome (none appeared to be).  However, Gitschier was able to predict the surname of many of the HapMap participants using these databases. ... Click to read more!

    Family Tree DNA Reaches 500,000 DNA Testing Kits

    Blaine Bettinger 6 Comments

    image In November 2007 I estimated that as of that date 600,000 to 700,000 DNA testing kits had been sold by genetic genealogy companies and that the number was increasing by 80,000 to 100,000 kits per year  (see “How Big is the Genetic Genealogy Market?”).  I ended that article with a prediction:  “As the interest in genetic genealogy grows, I predict that the 1 millionth genetic genealogy customer will push the ‘buy’ button as early as 2009.”

    It seems my prediction might not have been too far off.  This week, Family Tree DNA issued a press release stating that the company had recently received an order for the 500,000th testing kit.

    FTDNA’s Press Release:

    HOUSTON, February 9, 2009 (For Immediate Release) – Family Tree DNA (http://www.familytreedna.com), the world leader in genetic genealogy, announced today that it received its 500,000th DNA test order for genealogy and anthropology purposes. ... Click to read more!

    23andMe and mondoBIOTECH Announce Partnership

    Blaine Bettinger 17 Comments

    imageimage

    23andMe and mondoBIOTECH announced at Davos (the World Economic Forum in Switzerland) today that they will work together to further the study of rare diseases.  According to the press release (below), mondoBIOTECH will identify individuals suffering from certain rare diseases and sponsor their enrollment in the 23andMe Personal Genome Service™.  Researchers will use the information collected to learn more about the potential causes of these rare diseases.

    CNBC Video:

    Linda Avey appeared on CNBC this morning to discuss the company and the partnership – see “It’s All in the Genes.”

    The Press Release:

    Davos, Switzerland – January 28th 2009 – 23andMe, Inc., an industry leader in personal genetics, and Mondobiotech AG, a Swiss research company dedicated to the development of treatments for rare diseases, today announced at the World Economic Forum in Davos, Switzerland, that they are collaborating to advance research of rare diseases. ... Click to read more!

    The Genealogy Market 2009

    Blaine Bettinger 6 Comments

    GenealogyMarket I’ve long been interested in the success and long-term outlook of the genealogy market.  Although altruistic genealogists have done immense amounts of work to transcribe and put records online, one of the strongest forces behind the digitization of genealogical records has been private profit-driven organizations.  And these organizations, of course, rely on the viability of the market.

    FTM Media Kit

    Randy Seaver at Genea-Musings recently linked to Family Tree Magazine’s 46 page 2009 Media Kit, which contains extensive information about the genealogy market and the Family Tree Magazine audience.  The report is filled with statistics about all facets of genealogy and genealogists, and the author(s) include links to all their primary information. ... Click to read more!

    Humans Entered the Americas in More Than One Wave

    Blaine Bettinger 3 Comments

    image An international team of researchers have concluded that humans entered the Americas from Asia along at least two different paths.  By studying two rare mtDNA haplogroups found in Native Americans – D4h3 and X2a – the researchers conclude that D4h3 spread into the Americans along the Pacific coast while X2a entered through the ice-free corridor between the Laurentide and Cordilleran ice sheets.

    From the Press Release:  “Six major genetic lineages account for 95 percent of Native American mtDNA and are distributed everywhere in the Americas,” said first author Ugo Perego, director of operations at SMGF. “So we chose to analyze two rare genetic groups and eliminate that ‘statistical background noise.’ In this way, we found patterns that correspond to two separate migration routes.” ... Click to read more!